gene detail

Gene description

TAIR ID: AT3G12145

Short description: Leucine-rich repeat (LRR) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

long-day photoperiodism, flowering, regulation of timing of transition from vegetative to reproductive phase, vegetative to reproductive phase transition of meristem

GO cellular component

unkown

GO molecular function

enzyme inhibitor activity, transcription factor binding

Protein domain

Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF13516, Leucine Rich repeat

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G20770

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

No coexpression gene

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.48	3.25E-05
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.44	8.54E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.97	1.64E-11