Gene: AT3G11460
     

Gene description


TAIR ID: AT3G11460

Short description: Pentatricopeptide repeat (PPR) superfamily protein

Pathogen responsiveness: -2.47

General responsiveness: -3.26

Orthologous


Rice:

OS01G0819800  

Maize:

GRMZM2G399433  

Wheat: No orthologous gene

GO biological process


mRNA processing, cytidine to uridine editing


GO cellular component


mitochondrion, intracellular membrane-bounded organelle


GO molecular function


RNA binding, endonuclease activity, zinc ion binding, protein binding


Protein domain


PfamPF14432, DYW family of nucleic acid deaminases
PfamPF13041, PPR repeat family
PfamPF01535, PPR repeat

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.999.24E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.969.54E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.734.49E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.167.66E-03






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