gene detail

Gene description

TAIR ID: AT3G11100

Short description: sequence-specific DNA binding transcription factors

Pathogen responsiveness: -1.70

General responsiveness: -2.51

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of gene expression, ethylene-activated signaling pathway, regulation of transcription, DNA-templated

GO cellular component

nucleus, cytoplasm

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding, histone binding

Protein domain

Pfam	PF13837, Myb/SANT-like DNA-binding domain
SMART	SM00595, MADF

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G49450

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	2.12	1.09E-11
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.93	4.97E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.51	4.41E-13
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.55	1.58E-13
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.52	2.08E-05