Gene: AT3G10490
     


Gene description


TAIR ID: AT3G10490

Short description: NAC domain containing protein 52

Pathogen responsiveness: -1.58

General responsiveness: -2.16

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TA.4698.1.S1_AT  


GO biological process


photoperiodism, flowering, vegetative to reproductive phase transition of meristem, regulation of gene silencing by RNA, posttranscriptional gene silencing, negative regulation of transcription, DNA-templated, pollen development, histone H3-K4 demethylation, transcription, production of ta-siRNAs involved in RNA interference, multicellular organism development, response to molecule of bacterial origin


GO cellular component


nucleolus, nucleus


GO molecular function


sequence-specific DNA binding, transcription regulatory region sequence-specific DNA binding, protein binding, transcription factor activity


Protein domain


PfamPF02365, No apical meristem (NAM) protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.515.01E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.602.49E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.842.75E-12
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.554.99E-05






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