Gene description
Orthologous
GO biological process
protein destabilization, pollen germination, response to cadmium ion, pollen tube growth, negative regulation of defense response, cell cycle, cell division, protein transport
GO cellular component
phragmoplast, cytosolic ribosome, cytosol, nucleolus, Golgi apparatus, cell wall, nuclear envelope, plasmodesma, apoplast, spindle, plasma membrane, cytoplasm, nucleus
GO molecular function
identical protein binding, protein binding, ATP binding, ATPase activity, hydrolase activity
Protein domain
Pfam | PF02933, Cell division protein 48 (CDC48), domain 2 |
Pfam | PF00004, ATPase family associated with various cellular activities (AAA) |
Pfam | PF02359, Cell division protein 48 (CDC48), N-terminal domain |
SMART | SM01072, CDC48_2 |
SMART | SM00382, AAA |
SMART | SM01073, CDC48_N |
Metabolic pathway
Not involved in metabolic pathway
Protein-protein interaction network
The number of partners (degree) is: 20 (Top10%)
Coexpression network
Differentially expressed condition
5 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 2.07 | 4.32E-10 |
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 1.69 | 7.62E-07 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 2.84 | 5.51E-10 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.87 | 2.25E-07 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 2.83 | 5.21E-10 |
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