Gene: AT3G06480
     

Gene description


TAIR ID: AT3G06480

Short description: DEAD box RNA helicase family protein

Pathogen responsiveness: -3.09

General responsiveness: -2.00

Orthologous


Rice:

OS01G0549400  

Maize:

GRMZM2G703415  

Wheat: No orthologous gene

GO biological process


nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, rRNA processing


GO cellular component


vacuole, nucleus, integral component of membrane


GO molecular function


ATP binding, ATP-dependent helicase activity, RNA binding, nucleic acid binding, helicase activity


Protein domain


PfamPF00270, DEAD/DEAH box helicase
PfamPF00397, WW domain
PfamPF00271, Helicase conserved C-terminal domain
SMARTSM00456, WW
SMARTSM00487, DEXDc
SMARTSM00490, HELICc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.553.57E-02






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