Gene: AT3G03300
     


Gene description


TAIR ID: AT3G03300

Short description: dicer-like 2

Pathogen responsiveness: -2.83

General responsiveness: -2.52

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


RNA processing, defense response to virus, maintenance of DNA methylation, RNA virus induced gene silencing, production of ta-siRNAs involved in RNA interference


GO cellular component


cytoplasm, nucleus, RISC complex


GO molecular function


ribonuclease III activity, metal ion binding, protein binding, ATP binding, helicase activity, RNA binding, ATP-dependent helicase activity


Protein domain


PfamPF02170, PAZ domain
PfamPF00271, Helicase conserved C-terminal domain
PfamPF00636, Ribonuclease III domain
PfamPF03368, Dicer dimerisation domain
PfamPF00270, DEAD/DEAH box helicase
SMARTSM00358, DSRM
SMARTSM00535, RIBOc
SMARTSM00487, DEXDc
SMARTSM00490, HELICc
SMARTSM00949, PAZ

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.