Gene: AT3G01460
     


Gene description


TAIR ID: AT3G01460

Short description: methyl-CPG-binding domain 9

Pathogen responsiveness: -3.36

General responsiveness: -4.36

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G385338  

Wheat: No orthologous gene

GO biological process


histone H4 acetylation, histone H3 acetylation, protein ubiquitination, regulation of methylation-dependent chromatin silencing, regulation of transcription, DNA-templated, histone acetylation, transcription, photoperiodism, flowering, maintenance of DNA methylation, secondary shoot formation


GO cellular component


nucleus, nuclear heterochromatin, plasmodesma


GO molecular function


histone acetyltransferase activity, ubiquitin protein ligase activity, histone binding, metal ion binding


Protein domain


PfamPF15613, Williams-Beuren syndrome DDT (WSD), D-TOX E motif
PfamPF00628, PHD-finger
PfamPF15612, WSTF, HB1, Itc1p, MBD9 motif 1
PfamPF05964, F/Y-rich N-terminus
PfamPF01429, Methyl-CpG binding domain
PfamPF05965, F/Y rich C-terminus
SMARTSM00249, PHD

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.