Gene: AT2G46610
     

Gene description


TAIR ID: AT2G46610

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein

Pathogen responsiveness: -2.25

General responsiveness: -1.44

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


mRNA splicing, via spliceosome


GO cellular component


nucleus, spliceosomal complex, nuclear speck


GO molecular function


protein binding, RNA binding


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.621.08E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.952.10E-12
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.691.81E-03






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