gene detail

Gene description

TAIR ID: AT2G43610

Short description: Chitinase family protein

Pathogen responsiveness: -0.81

General responsiveness: 3.15

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

cell wall macromolecule catabolic process, polysaccharide catabolic process, chitin catabolic process, defense response

GO cellular component

plasma membrane, extracellular region

GO molecular function

chitinase activity, chitin binding

Protein domain

Pfam	PF00182, Chitinase class I
Pfam	PF00187, Chitin recognition protein
SMART	SM00270, ChtBD1

Metabolic pathway

PWY-6902: chitin degradation II

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_WT_GO view
GSE13739_EDS16_GO view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	2.48	1.60E-05
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	2.41	4.14E-05
GSE17464	Laer, control	Laer, Flg22 1 h	2.91	5.09E-08
GSE17464	Laer, control	Laer, Flg22 2 h	2.57	1.63E-06
GSE17464	Penta, control	Penta, Flg22 2 h	3.02	2.01E-08
GSE17464	Penta, control	Penta, Flg22 2 h	2.83	3.52E-07
GSE37269	St0, WT, control	St0, WT, TEV 21 d	1.77	1.71E-02
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.70	3.12E-04
GSE62537	Col, WT, control 48 h	Col, WT, V.longisporum 48 h	1.72	1.24E-02
GSE62537	Col, ndr1, control 48 h	Col, ndr1, V.longisporum 48 h	1.96	5.09E-03