Gene: AT2G42940
     

Gene description


TAIR ID: AT2G42940

Short description: Predicted AT-hook DNA-binding family protein

Pathogen responsiveness: NA

General responsiveness: -3.93

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


pollen wall assembly, negative regulation of histone acetylation, positive regulation of histone H3-K9 dimethylation, regulation of transcription, DNA-templated, negative regulation of transposition, vegetative to reproductive phase transition of meristem, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, AT DNA binding, protein binding


Protein domain


PfamPF03479, Domain of unknown function (DUF296)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G41315, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-5.986.16E-09
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-2.539.42E-03






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