gene detail

Gene description

TAIR ID: AT2G42400

Short description: vascular plant one zinc finger protein 2

Pathogen responsiveness: -2.00

General responsiveness: -2.26

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

red, far-red light phototransduction, positive regulation of transcription, DNA-templated, long-day photoperiodism, flowering, positive regulation of long-day photoperiodism, transcription

GO cellular component

nucleus, cytoplasm

GO molecular function

sequence-specific DNA binding, metal ion binding, protein binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT3G16857, AT4G16110, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.70	2.62E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.74	1.24E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.59	1.36E-07