gene detail

Gene description

TAIR ID: AT2G40670

Short description: response regulator 16

Pathogen responsiveness: 0.31

General responsiveness: -0.14

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, cytokinin-activated signaling pathway, transcription, response to cytokinin, phosphorelay signal transduction system

GO cellular component

cytoplasm, nucleus

GO molecular function

protein binding, phosphorelay response regulator activity

Protein domain

Pfam	PF00072, Response regulator receiver domain
SMART	SM00448, REC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	-3.01	1.53E-09
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-2.52	4.23E-09
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-1.70	3.66E-05
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	-2.12	1.68E-06
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.91	4.70E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.37	2.17E-05
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a C216aA 6 h	1.79	5.51E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.40	3.24E-12
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.63	2.88E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	3.32	4.39E-12
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.16	5.55E-09
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-1.97	3.72E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.51	9.12E-03
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.67	4.39E-07
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-1.62	3.05E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.99	6.52E-12
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.75	1.35E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.88	1.11E-11
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	-2.29	5.91E-06
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	-1.80	7.07E-05
GSE5685	Col, WT, control 16 h	Col, WT, Ps ES4326 AvrRpt2 16 h	-2.69	6.53E-03
GSE5685	Col, WT, control 16 h	Col, WT, Ps ES4326 16 h	-2.85	3.13E-02
GSE5685	Col, WT, control 24 h	Col, WT, Ps ES4326 24 h	-2.51	5.84E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.36	5.25E-04