Gene: AT2G40550
     

Gene description


TAIR ID: AT2G40550

Short description: E2F target gene 1

Pathogen responsiveness: -1.76

General responsiveness: -2.13

Orthologous


Rice: No orthologous gene
Maize:

GRMZM5G804783  

Wheat:

TA.3224.2.S1_AT  


GO biological process


DNA-dependent DNA replication, postreplication repair, sister chromatid cohesion, DNA replication, cell division


GO cellular component


nucleus, chloroplast envelope, nuclear chromatin, MCM complex


GO molecular function


protein binding, chromatin binding


Protein domain


PfamPF09739, Mini-chromosome maintenance replisome factor

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G36010, AT3G24050, AT5G22220, AT4G34680, AT2G45050, AT3G60530, AT5G49450, AT5G02470

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 16 (Top20%)

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.999.93E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.101.54E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.851.31E-09






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.