gene detail

Gene description

TAIR ID: AT2G39725

Short description: LYR family of Fe/S cluster biogenesis protein

Pathogen responsiveness: -0.28

General responsiveness: -0.45

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

mitochondrion

GO molecular function

catalytic activity

Protein domain

Pfam	PF05347, Complex 1 protein (LYR family)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.71	1.66E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	2.12	5.91E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.74	1.36E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.47	3.48E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.77	2.28E-11
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.81	1.05E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.71	1.74E-12
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.01	8.26E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.83	3.26E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.84	9.89E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.84	2.06E-10
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.97	3.32E-11
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.94	6.20E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.79	5.95E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.94	1.47E-10
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	1.54	4.61E-07