gene detail

Gene description

TAIR ID: AT2G35190

Short description: novel plant snare 11

Pathogen responsiveness: -0.99

General responsiveness: -0.45

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G065105

Wheat: No orthologous gene

GO biological process

cytokinesis, vesicle fusion with Golgi apparatus, ER to Golgi vesicle-mediated transport, Golgi to vacuole transport, intra-Golgi vesicle-mediated transport, protein targeting to vacuole, retrograde transport, endosome to Golgi

GO cellular component

endoplasmic reticulum membrane, late endosome membrane, plasma membrane, ER to Golgi transport vesicle membrane, SNARE complex, integral component of membrane, cell plate, Golgi apparatus

GO molecular function

protein transporter activity, SNAP receptor activity, SNARE binding

Protein domain

Pfam	PF03908, Sec20
SMART	SM00397, t_SNARE

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.75	2.31E-03
GSE17464	Penta, control	Penta, Flg22 2 h	1.65	1.36E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.05	3.16E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.51	2.56E-02
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.25	9.00E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.69	1.05E-04