Gene: AT2G31780
     


Gene description


TAIR ID: AT2G31780

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -3.26

General responsiveness: -5.10

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein polyubiquitination, positive regulation of proteasomal ubiquitin-dependent protein catabolic process, protein ubiquitination involved in ubiquitin-dependent protein catabolic process


GO cellular component


nucleus, ubiquitin ligase complex, cytoplasm


GO molecular function


ubiquitin protein ligase activity, ubiquitin conjugating enzyme binding, metal ion binding


Protein domain


PfamPF01485, IBR domain, a half RING-finger domain
SMARTSM00647, IBR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.623.58E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.551.53E-02






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