gene detail

Gene description

TAIR ID: AT2G31260

Short description: autophagy 9 (APG9)

Pathogen responsiveness: -1.78

General responsiveness: -1.77

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G035461

Wheat:

TA.5613.1.A1_AT

GO biological process

late nucleophagy, autophagy, autophagy of mitochondrion, protein transport, protein localization to pre-autophagosomal structure, defense response to fungus

GO cellular component

pre-autophagosomal structure, autophagosome, nucleus, integral component of membrane, cytoplasmic vesicle, autophagosome membrane

GO molecular function

unkown

Protein domain

Pfam	PF04109, Autophagy protein Apg9

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04136: Autophagy - other eukaryotes

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_PSTDC3000 view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.66	5.15E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.93	5.25E-08
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.61	4.29E-04