gene detail

Gene description

TAIR ID: AT2G30620

Short description: winged-helix DNA-binding transcription factor family protein

Pathogen responsiveness: -1.46

General responsiveness: -2.13

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G164020

Wheat: No orthologous gene

GO biological process

nucleosome assembly

GO cellular component

nucleus, nucleolus, nucleosome, mitochondrion

GO molecular function

DNA binding

Protein domain

Pfam	PF00538, linker histone H1 and H5 family
SMART	SM00526, H15

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

No regulation information

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.58	1.86E-10
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.19	5.72E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.78	4.32E-09