Gene: AT2G29760
     

Gene description


TAIR ID: AT2G29760

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -1.58

General responsiveness: -1.15

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


chloroplast RNA processing, RNA modification


GO cellular component


chloroplast


GO molecular function


zinc ion binding, endonuclease activity, RNA binding


Protein domain


PfamPF14432, DYW family of nucleic acid deaminases
PfamPF13041, PPR repeat family
PfamPF01535, PPR repeat

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT1G62300, AT5G22570, AT2G46130, AT4G31550

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.591.27E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.704.45E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.628.38E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.858.06E-07






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