Gene: AT2G29630
     

Gene description


TAIR ID: AT2G29630

Short description: thiaminC

Pathogen responsiveness: 0.56

General responsiveness: 2.35

Orthologous


Rice:

OS03G0679700  

Maize:

GRMZM2G027663  

Wheat: No orthologous gene

GO biological process


thiamine biosynthetic process, thiamine diphosphate biosynthetic process, detection of bacterium, response to vitamin B1


GO cellular component


chloroplast, chloroplast stroma, plastid


GO molecular function


ADP-ribose pyrophosphohydrolase activity, metal ion binding, 4 iron, 4 sulfur cluster binding, catalytic activity, lyase activity, iron-sulfur cluster binding


Protein domain


PfamPF01964, Radical SAM ThiC family

Transcriptional regulation


Regulator:
AT5G11260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


33 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.011.35E-04
GSE17464Penta, controlPenta, PstDC3000 12 h2.135.02E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.081.90E-06
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.013.23E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.824.65E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.015.41E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.721.11E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.901.00E-11
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-1.522.96E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.674.02E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.651.32E-06
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.882.61E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.115.59E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.533.67E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.233.39E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.581.46E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.021.09E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.452.93E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.611.11E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-3.082.72E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.358.16E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.564.82E-07
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.352.49E-06
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.905.34E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.127.91E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.751.19E-03
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.741.44E-03
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.297.35E-06
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.531.98E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.412.75E-06
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.371.07E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.621.05E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.882.46E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.