gene detail

Gene description

TAIR ID: AT2G29540

Short description: RNApolymerase 14 kDa subunit

Pathogen responsiveness: -1.09

General responsiveness: -0.80

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

transcription, DNA-templated, tRNA transcription

GO cellular component

nucleus, DNA-directed RNA polymerase I complex, DNA-directed RNA polymerase III complex

GO molecular function

protein dimerization activity, RNA polymerase I activity, DNA-directed 5'-3' RNA polymerase activity, DNA binding, RNA polymerase III activity

Protein domain

Pfam	PF13656, RNA polymerase Rpb3/Rpb11 dimerisation domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.53	2.02E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.86	4.30E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	-2.40	1.57E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.27	1.36E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.26	2.84E-13
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.69	1.69E-08
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.68	1.38E-08
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.77	6.00E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.55	1.67E-03