Gene: AT2G28830
     

Gene description


TAIR ID: AT2G28830

Short description: PLANT U-BOX 12

Pathogen responsiveness: -1.59

General responsiveness: -3.06

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination, response to chitin


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity, defense response to bacterium


Protein domain


PfamPF00514, Armadillo/beta-catenin-like repeat
PfamPF04564, U-box domain
PfamPF00252, Ribosomal protein L16p/L10e
SMARTSM00185, ARM
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G62300

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h-1.683.43E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h-1.941.02E-03






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