gene detail

Gene description

TAIR ID: AT2G28760

Short description: UDP-XYL synthase 6

Pathogen responsiveness: -1.68

General responsiveness: -0.32

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

nucleotide-sugar metabolic process, D-xylose metabolic process, UDP-D-xylose biosynthetic process

GO cellular component

cytoplasm, plasma membrane

GO molecular function

NAD+ binding, UDP-glucuronate decarboxylase activity, catalytic activity

Protein domain

Pfam	PF16363, GDP-mannose 4,6 dehydratase

Metabolic pathway

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT1G32770, AT1G71930

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE56094_WT_HRPA- view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	1.92	5.71E-03
GSE17464	Laer, control	Laer, Flg22 2 h	2.34	3.11E-04
GSE17464	Penta, control	Penta, Flg22 2 h	1.89	2.86E-03
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	1.66	4.16E-03