gene detail

Gene description

TAIR ID: AT2G28710

Short description: C2H2-type zinc finger family protein

Pathogen responsiveness: 0.31

General responsiveness: -1.65

Orthologous

Rice: No orthologous gene

Maize:

GRMZM5G804618

Wheat:

TAAFFX.130052.2.S1_AT TA.13474.1.S1_AT TAAFFX.32426.1.S1_AT TAAFFX.32426.1.S1_X_AT

GO biological process

regulation of transcription, DNA-templated

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, nucleic acid binding

Protein domain

Pfam	PF13912, C2H2-type zinc finger
SMART	SM00355, ZnF_C2H2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G41315

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

29 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	2.07	1.90E-02
GSE11807	Col, erf104 ko, water 4 h	Col, erf104 ko, Flg22 4 h	1.76	4.06E-02
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 5 d	1.54	4.30E-09
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	3.05	2.90E-19
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	3.10	3.21E-19
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.56	3.30E-04
GSE17464	Laer, control	Laer, Flg22 2 h	2.16	2.58E-06
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.76	3.80E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.86	2.24E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.38	1.11E-07
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	3.06	3.62E-09
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_0157_H7 7 h	1.65	4.30E-03
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_TUV86 flic- 7 h	1.72	1.98E-03
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	2.19	1.03E-09
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.55	2.28E-06
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.72	1.69E-06
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	1.72	2.22E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.70	9.60E-07
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	1.63	3.49E-06
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	2.72	4.80E-12
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.60	1.05E-07
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.89	3.87E-13
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	1.79	2.32E-09
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 HrpA- 12 h	2.06	6.59E-05
GSE6176	Col, WT, control 2 h	Col, WT, PstDC3000 HrpA- 2 h	1.80	3.62E-03
GSE6176	Col, WT, control 4 h	Col, WT, PstDC3000 AvrRpm1 4 h	1.81	4.43E-04
GSE6176	Col, WT, control 4 h	Col, WT, PstDC3000 HrpA- 4 h	1.91	1.75E-03
GSE6176	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.66	5.69E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	1.74	2.72E-03