Gene: AT2G27880
     

Gene description


TAIR ID: AT2G27880

Short description: Argonaute family protein

Pathogen responsiveness: -2.37

General responsiveness: -3.07

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


gene silencing by RNA, defense response, incompatible interaction, regulation of transcription, DNA-templated, transcription, response to virus, viral gene silencing in virus induced gene silencing, regulation of translation


GO cellular component


cytoplasm, intracellular ribonucleoprotein complex


GO molecular function


RNA binding, metal ion binding, cytosol


Protein domain


PfamPF16486, N-terminal domain of argonaute
PfamPF02171, Piwi domain
PfamPF16488, Argonaute linker 2 domain
PfamPF08699, Argonaute linker 1 domain
PfamPF02170, PAZ domain
PfamPF16487, Mid domain of argonaute
SMARTSM00949, PAZ
SMARTSM00950, Piwi
SMARTSM01163, DUF1785

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.418.10E-05






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