Gene: AT2G25170
     


Gene description


TAIR ID: AT2G25170

Short description: chromatin remodeling factor CHD3 (PICKLE)

Pathogen responsiveness: -2.70

General responsiveness: -3.28

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


negative regulation of transcription, DNA-templated, chromatin remodeling, regulation of lateral root development, response to gibberellin, cytokinin-activated signaling pathway, negative regulation of abscisic acid-activated signaling pathway, covalent chromatin modification, response to auxin, cell proliferation, root development


GO cellular component


nucleus


GO molecular function


DNA helicase activity, ATP binding, ATPase activity, helicase activity, metal ion binding


Protein domain


PfamPF00385, Chromo (CHRromatin Organisation MOdifier) domain
PfamPF00176, SNF2 family N-terminal domain
PfamPF00271, Helicase conserved C-terminal domain
PfamPF00628, PHD-finger
PfamPF06461, Domain of Unknown Function (DUF1086)
PfamPF06465, Domain of Unknown Function (DUF1087)
SMARTSM00298, CHROMO
SMARTSM00249, PHD
SMARTSM00490, HELICc
SMARTSM01146, DUF1086
SMARTSM00487, DEXDc
SMARTSM01147, DUF1087

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.