gene detail

Gene description

TAIR ID: AT2G23980

Short description: cyclic nucleotide-gated channel 6

Pathogen responsiveness: -2.68

General responsiveness: -1.80

Orthologous

Rice:

OS12G0468500

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of membrane potential, response to cadmium ion

GO cellular component

plasma membrane, cell periphery, integral component of plasma membrane, integral component of membrane

GO molecular function

voltage-gated potassium channel activity, intracellular cGMP activated cation channel activity, ion channel activity, calmodulin binding, cAMP binding, cGMP binding

Protein domain

Pfam	PF00520, Ion transport protein
SMART	SM00100, cNMP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.69	4.70E-09