Gene: AT2G22770
     

Gene description


TAIR ID: AT2G22770

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -0.42

General responsiveness: 0.39

Orthologous


Rice:

OS12G0632600   OS04G0381700   OS04G0301500   OS05G0597000   OS03G0188400   OS05G0586300  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, endoplasmic reticulum organization, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein dimerization activity, DNA binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
none

Target:
AT3G09260, AT2G39310, AT3G15950, AT2G39330, AT3G16420, AT3G16430

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h2.309.77E-05
GSE21920Col, WT, mockCol, WT, Pto 6 h2.227.52E-04
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h2.022.98E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.351.10E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.349.46E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.811.51E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.311.23E-08
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.761.06E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h4.871.16E-11
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.044.19E-06






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