gene detail

Gene description

TAIR ID: AT2G20160

Short description: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein

Pathogen responsiveness: -3.70

General responsiveness: -6.07

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ubiquitin-dependent protein catabolic process, protein ubiquitination

GO cellular component

nucleus

GO molecular function

protein binding, ubiquitin-protein transferase activity

Protein domain

Pfam	PF01466, Skp1 family, dimerisation domain
Pfam	PF03931, Skp1 family, tetramerisation domain
SMART	SM00512, Skp1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04141: Protein processing in endoplasmic reticulum
PATH:ath04120: Ubiquitin mediated proteolysis

Transcriptional regulation

Regulator:
AT1G13450

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 15 (Top20%)

click to view PPI network

Coexpression network

No coexpression gene

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.50	1.85E-05