gene detail

Gene description

TAIR ID: AT2G20030

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.19

General responsiveness: -0.56

Orthologous

Rice:

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein ubiquitination

GO cellular component

integral component of membrane

GO molecular function

metal ion binding

Protein domain

Pfam	PF13639, Ring finger domain
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.86	2.23E-07
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-4.16	3.20E-08
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-3.66	6.80E-08
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.79	1.11E-09