gene detail

Gene description

TAIR ID: AT2G18915

Short description: LOV KELCH protein 2

Pathogen responsiveness: -2.90

General responsiveness: -2.66

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ubiquitin-dependent protein catabolic process, protein-chromophore linkage, protein ubiquitination, rhythmic process, circadian rhythm, flower development, regulation of circadian rhythm

GO cellular component

cytosol, Cajal body, nucleus

GO molecular function

protein binding, ubiquitin-protein transferase activity, photoreceptor activity

Protein domain

Pfam	PF07646, Kelch motif
Pfam	PF13418, Galactose oxidase, central domain
Pfam	PF13426, PAS domain
Pfam	PF12937, F-box-like
Pfam	PF13415, Galactose oxidase, central domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 32 (Top5%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.50	5.81E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.51	1.01E-02