Gene: AT2G18050
     

Gene description


TAIR ID: AT2G18050

Short description: histone H1-3

Pathogen responsiveness: 0.52

General responsiveness: 1.23

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to water deprivation, nucleosome assembly


GO cellular component


nucleosome, nucleus


GO molecular function


DNA binding


Protein domain


PfamPF00538, linker histone H1 and H5 family
SMARTSM00526, H15

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G45249

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h-2.192.31E-02
GSE12856Col, WT, controlCol, WT, Bg h-1.521.74E-07
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.533.80E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d3.201.98E-07
GSE17464Laer, controlLaer, PstDC3000 12 h2.941.51E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d3.579.36E-09
GSE17464Penta, controlPenta, PstDC3000 12 h2.103.93E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h3.545.48E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h4.358.69E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.702.13E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h5.122.58E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.422.62E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.041.21E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.693.16E-10
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.399.60E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.741.66E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.291.36E-03
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h-1.664.86E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.802.17E-03
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d-2.062.68E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h-2.797.48E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.959.68E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.644.34E-03






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