Gene: AT2G17660
     


Gene description


TAIR ID: AT2G17660

Short description: RPM1-interacting protein 4 (RIN4) family protein

Pathogen responsiveness: -0.51

General responsiveness: 0.00

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to nitrate


GO cellular component


unkown


GO molecular function


molecular_function


Protein domain


PfamPF05627, Cleavage site for pathogenic type III effector avirulence factor Avr

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-3.702.13E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.771.80E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.232.42E-04
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.376.41E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.922.41E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.651.04E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.441.01E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.371.49E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.935.58E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.131.38E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.642.20E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.881.13E-08
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.621.46E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.941.77E-03






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