Gene: AT2G06990
     

Gene description


TAIR ID: AT2G06990

Short description: RNA helicase, ATP-dependent, SK12/DOB1 protein

Pathogen responsiveness: -3.14

General responsiveness: -1.89

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G047949  

Wheat:

TA.6563.1.A1_AT  TA.6563.1.A1_X_AT  


GO biological process


negative regulation of posttranscriptional gene silencing, RNA metabolic process, nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay, mRNA processing, specification of floral organ identity


GO cellular component


nuclear speck, cytosol, nucleus, Ski complex, nucleoplasm


GO molecular function


ATP binding, RNA binding, RNA helicase activity, ATP-dependent RNA helicase activity, ATP-dependent helicase activity


Protein domain


PfamPF00271, Helicase conserved C-terminal domain
PfamPF08148, DSHCT (NUC185) domain
PfamPF00270, DEAD/DEAH box helicase
PfamPF13234, rRNA-processing arch domain
SMARTSM00487, DEXDc
SMARTSM00490, HELICc
SMARTSM01142, DSHCT

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G41315

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.