gene detail

Gene description

TAIR ID: AT2G02870

Short description: Galactose oxidase/kelch repeat superfamily protein

Pathogen responsiveness: -0.47

General responsiveness: -1.97

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

chloroplast, nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF01344, Kelch motif
SMART	SM00612, Kelch

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

19 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.60	1.48E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.57	7.97E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.82	4.89E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.67	5.15E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.99	7.74E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.32	9.22E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.71	6.79E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.56	5.02E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.53	8.28E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.53	2.01E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.83	8.93E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.46	1.16E-17
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.04	2.68E-13
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.55	2.45E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.14	3.87E-14
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.62	5.49E-19
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	1.68	5.97E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	2.04	7.20E-13
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.68	1.49E-03