Gene: AT1G80000
     


Gene description


TAIR ID: AT1G80000

Short description: CASC3/Barentsz eIF4AIII binding

Pathogen responsiveness: -2.59

General responsiveness: -2.49

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G028190  

Wheat: No orthologous gene

GO biological process


RNA splicing, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, regulation of translation, mRNA processing, mRNA transport


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF09405, CASC3/Barentsz eIF4AIII binding
SMARTSM01044, Btz

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660, AT5G13790, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Up_regulationDown_regulationNo10Bacteria (1/59)00Fungi (0/29)00Oomycetes (0/14)00Viruses (0/9)00Elicitors (0/59)

1 conditions









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