gene detail

Gene description

TAIR ID: AT1G80000

Short description: CASC3/Barentsz eIF4AIII binding

Pathogen responsiveness: -2.59

General responsiveness: -2.49

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

RNA splicing, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, regulation of translation, mRNA processing, mRNA transport

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF09405, CASC3/Barentsz eIF4AIII binding
SMART	SM01044, Btz

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G53660, AT5G13790, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 17 (Top10%)

Coexpression network

No coexpression gene

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.60	1.40E-11