Gene: AT1G79880
     

Gene description


TAIR ID: AT1G79880

Short description: RNA recognition motif (RRM)-containing protein

Pathogen responsiveness: -2.02

General responsiveness: -2.21

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus, intracellular ribonucleoprotein complex


GO molecular function


unkown


Protein domain


PfamPF05383, La domain
PfamPF08777, RNA binding motif
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM
SMARTSM00715, LA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.771.69E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.664.37E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.791.19E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.981.15E-10






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