Gene: AT1G78600
     


Gene description


TAIR ID: AT1G78600

Short description: light-regulated zinc finger protein 1

Pathogen responsiveness: -0.48

General responsiveness: -0.86

GO biological process


chlorophyll biosynthetic process, regulation of transcription, DNA-templated, anthocyanin-containing compound biosynthetic process, shade avoidance, transcription, regulation of photomorphogenesis, chloroplast organization


GO cellular component


nucleus, nuclear speck


GO molecular function


transcription factor activity, transcription factor binding, sequence-specific DNA binding, protein binding, zinc ion binding


Protein domain


PfamPF00643, B-box zinc finger
SMARTSM00336, BBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260, AT5G61850

Target:
AT2G40890, AT1G56650, AT2G34710

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-2.456.47E-17
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-2.287.69E-16
GSE17464Laer, controlLaer, PstDC3000 12 h-3.723.73E-13
GSE17464Penta, controlPenta, PstDC3000 12 h-3.424.84E-12
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.575.18E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.521.28E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.641.29E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.561.79E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.271.39E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.261.46E-14






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