gene detail

Gene description

TAIR ID: AT1G78310

Short description: VQ motif-containing protein

Pathogen responsiveness: -1.41

General responsiveness: -1.04

Orthologous

Rice:

OS03G0190000

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

negative regulation of sequence-specific DNA binding transcription factor activity, negative regulation of response to salt stress, cellular sodium ion homeostasis, cellular potassium ion homeostasis

GO cellular component

nucleus

GO molecular function

protein binding

Protein domain

Pfam	PF05678, VQ motif

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT3G24050

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.63	7.01E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.72	2.12E-03
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.65	2.05E-02
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	2.14	1.33E-03