gene detail

Gene description

TAIR ID: AT1G74850

Short description: plastid transcriptionally active 2

Pathogen responsiveness: -0.35

General responsiveness: 0.50

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

transcription from plastid promoter, positive regulation of transcription, DNA-templated, RNA modification

GO cellular component

plastid chromosome, chloroplast, nucleoid

GO molecular function

endonuclease activity, RNA binding

Protein domain

Pfam	PF13812, Pentatricopeptide repeat domain
Pfam	PF01535, PPR repeat
Pfam	PF13041, PPR repeat family
SMART	SM00463, SMR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	-1.65	1.81E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-1.63	2.36E-04
GSE17464	Penta, control	Penta, Flg22 2 h	-1.80	4.91E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-2.04	9.64E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.34	3.49E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.51	3.71E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.60	5.78E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.51	4.01E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.57	1.81E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.07	9.92E-13
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.91	4.74E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.75	7.59E-17
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.72	7.71E-16
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.50	1.53E-13
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.52	2.80E-13