Gene: AT1G72920
     

Gene description


TAIR ID: AT1G72920

Short description: Toll-Interleukin-Resistance (TIR) domain family protein

Pathogen responsiveness: 1.38

General responsiveness: 0.56

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, signal transduction, response to wounding


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF01582, TIR domain
SMARTSM00255, TIR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


57 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.169.98E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.373.12E-09
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h2.206.26E-06
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h1.945.65E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.541.93E-02
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.882.38E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.501.17E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.961.37E-05
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h2.291.20E-09
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.334.67E-07
GSE2169Col, WT, waterCol, WT, chitin 30 min1.712.12E-07
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.202.52E-09
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.011.14E-08
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.256.19E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.971.35E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.872.63E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.591.38E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-2.222.09E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.979.02E-08
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.977.53E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.964.83E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.603.06E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.538.76E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.834.66E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.781.49E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.691.16E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.364.21E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.644.68E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.403.13E-10
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.965.00E-16
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.679.91E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.042.45E-16
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.562.62E-15
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min4.293.27E-05
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h1.828.29E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.531.94E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h1.693.17E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.431.14E-03
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h2.181.15E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h3.013.07E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.577.43E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.163.92E-14
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.132.13E-13
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.092.36E-13
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h1.601.39E-07
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h2.215.82E-13
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.891.76E-10
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.419.47E-16
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.228.19E-14
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.079.51E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.511.11E-02
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d1.696.17E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.598.18E-16
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.671.84E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.346.52E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.513.60E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.278.79E-04






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