Gene: AT1G71260
     

Gene description


TAIR ID: AT1G71260

Short description: WHIRLY 2

Pathogen responsiveness: -1.10

General responsiveness: -2.33

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G012262  

Wheat: No orthologous gene

GO biological process


DNA repair, regulation of transcription, DNA-templated, defense response


GO cellular component


mitochondrion, chloroplast


GO molecular function


single-stranded DNA binding


Protein domain


PfamPF08536, Whirly transcription factor

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.997.70E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.534.91E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.759.19E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.651.06E-12






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