Gene: AT1G68200
     

Gene description


TAIR ID: AT1G68200

Short description: Zinc finger C-x8-C-x5-C-x3-H type family protein

Pathogen responsiveness: -0.03

General responsiveness: -4.18

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


3'-UTR-mediated mRNA destabilization, regulation of transcription, DNA-templated


GO cellular component


nucleus, cytosol


GO molecular function


metal ion binding, transcription factor activity, sequence-specific DNA binding, mRNA 3'-UTR binding


Protein domain


PfamPF00642, Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SMARTSM00356, ZnF_C3H1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G36010, AT3G24050, AT5G02470

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.501.42E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h2.532.71E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-2.138.26E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.981.46E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.781.60E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.593.14E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.727.26E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.906.01E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.286.09E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.971.84E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.362.36E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.084.40E-06
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.523.58E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.225.36E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.105.02E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.673.61E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.721.74E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.651.39E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.631.87E-06






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