gene detail

Gene description

TAIR ID: AT1G66390

Short description: myb domain protein 90

Pathogen responsiveness: 0.19

General responsiveness: 0.69

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to karrikin, regulation of transcription, DNA-templated, regulation of transcription from RNA polymerase II promoter, transcription, cell differentiation

GO cellular component

nucleus

GO molecular function

protein binding, sequence-specific DNA binding, transcription regulatory region DNA binding, transcription factor activity, RNA polymerase II transcription factor recruiting, RNA polymerase II transcription factor activity

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G38250, AT1G56650

Target:
AT2G37260

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

18 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-1.80	3.21E-03
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-2.17	4.83E-04
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-2.87	3.86E-07
GSE17464	Laer, control	Laer, PstDC3000 12 h	-3.07	7.96E-08
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.72	1.73E-03
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.75	1.42E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.16	1.79E-03
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.83	1.41E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.46	5.86E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.00	1.18E-03
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-4.64	3.23E-06
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-4.98	6.45E-08
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-3.29	1.54E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-4.77	1.63E-07
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.56	3.61E-07
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-2.02	4.94E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.65	3.37E-03
GSE5686	Col, WT, control 4 d	Col, WT, G.orontii 4 d	-1.69	2.07E-02