gene detail

Gene description

TAIR ID: AT1G64400

Short description: AMP-dependent synthetase and ligase family protein

Pathogen responsiveness: 0.79

General responsiveness: -0.02

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

fatty acid biosynthetic process, fatty acid metabolic process

GO cellular component

nucleus, endoplasmic reticulum

GO molecular function

ATP binding, long-chain fatty acid-CoA ligase activity, decanoate--CoA ligase activity

Protein domain

Pfam	PF00501, AMP-binding enzyme

Metabolic pathway

PWY-5136: fatty acid β-oxidation II (peroxisome)
PWY-5995: linoleate biosynthesis I (plants)
PWY-5143: fatty acid activation
PWY-6803: phosphatidylcholine acyl editing

KEGG pathway

PATH:ath01212: Fatty acid metabolism
PATH:ath00061: Fatty acid biosynthesis
PATH:ath00071: Fatty acid degradation
PATH:ath04146: Peroxisome

Transcriptional regulation

Regulator:
AT3G27920

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

35 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	1.70	1.98E-02
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	3.21	7.98E-05
GSE11807	Col, mpk6 ko, water 4 h	Col, mpk6 ko, Flg22 4 h	2.06	6.61E-03
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.55	1.94E-05
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	1.94	4.29E-12
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	1.69	3.81E-10
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.79	3.50E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	2.41	7.20E-04
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	2.90	9.23E-05
GSE17464	Laer, control	Laer, Flg22 1 h	2.55	5.76E-05
GSE17464	Laer, control	Laer, Flg22 2 h	2.88	1.23E-05
GSE17464	Penta, control	Penta, Flg22 2 h	2.38	1.54E-04
GSE17464	Penta, control	Penta, Flg22 2 h	2.85	1.34E-05
GSE18329	Col, WT, control	Col, WT, Hpa noco2 96 h	2.04	2.02E-10
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	2.75	1.15E-12
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	2.95	4.34E-13
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.07	3.38E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.75	9.91E-07
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	3.07	1.13E-10
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	1.69	1.30E-06
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	3.47	2.00E-11
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.62	1.36E-04
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	1.95	1.22E-05
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	2.35	1.60E-07
GSE56094	Col, WT, control 4 h	Col, WT, hrpA- 4 h	1.62	1.16E-03
GSE56094	Col, WT, control 5 h	Col, WT, hrpA- 5 h	1.88	3.24E-05
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	2.47	4.63E-08
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	2.22	6.38E-07
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	2.25	1.97E-07
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	1.52	3.95E-04
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.98	1.15E-04
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.51	1.51E-03
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.20	8.13E-06
GSE62537	Col, WT, control 48 h	Col, WT, V.longisporum 48 h	3.15	7.30E-05
GSE62537	Col, ndr1, control 48 h	Col, ndr1, V.longisporum 48 h	3.67	2.37E-05