gene detail

Gene description

TAIR ID: AT1G64280

Short description: regulatory protein (NPR1)

Pathogen responsiveness: -0.89

General responsiveness: -1.79

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G077197

Wheat: No orthologous gene

GO biological process

regulation of jasmonic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, response to insect, response to bacterium, plant-type hypersensitive response, regulation of salicylic acid mediated signaling pathway, protein ubiquitination, response to heat, negative regulation of defense response, positive regulation of transcription, DNA-templated, response to hypoxia, regulation of systemic acquired resistance, defense response to fungus, induced systemic resistance, response to wounding, cell death

GO cellular component

cytoplasm, nucleus

GO molecular function

protein binding

Protein domain

Pfam	PF12313, NPR1/NIM1 like defence protein C terminal
Pfam	PF00651, BTB/POZ domain
Pfam	PF12796, Ankyrin repeats (3 copies)
Pfam	PF11900, Domain of unknown function (DUF3420)
SMART	SM00225, BTB
SMART	SM00248, ANK

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G13790, AT5G01900, AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 21 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.65	4.41E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.24	6.88E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.64	3.04E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.84	1.59E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.91	3.77E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.60	1.86E-09
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.59	6.84E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.52	1.13E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.83	7.08E-06