gene detail

Gene description

TAIR ID: AT1G61470

Short description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

RNA modification, regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

RNA binding, metal ion binding, ribonuclease activity

Protein domain

Pfam	PF04857, CAF1 family ribonuclease

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03018: RNA degradation

Transcriptional regulation

Regulator:
AT2G22300

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	2.13	3.13E-03
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	2.41	9.73E-05
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.83	2.57E-09
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.68	1.28E-08
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	1.59	2.45E-08
GSE56094	Col, WT, control 5 h	Col, WT, hrpA- 5 h	1.59	2.76E-08
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	1.55	4.96E-08