gene detail

Gene description

TAIR ID: AT1G60960

Short description: iron regulated transporter 3

Pathogen responsiveness: -0.78

General responsiveness: 0.44

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

metal ion transport, response to nematode, iron ion transport, transmembrane transport, cation transport, zinc II ion transport, zinc II ion transmembrane transport, iron ion homeostasis

GO cellular component

chloroplast thylakoid membrane, vacuolar membrane, plasma membrane, integral component of membrane, chloroplast, membrane

GO molecular function

zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity, cation transmembrane transporter activity, iron ion transmembrane transporter activity

Protein domain

Pfam	PF02535, ZIP Zinc transporter

Metabolic pathway

PWY-5934: iron reduction and absorption

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G35040, AT2G16770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.53	7.58E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.74	6.23E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.01	2.69E-07
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.40	9.07E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.36	1.56E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.04	4.23E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.91	3.93E-10