Gene: AT1G60650
     

Gene description


TAIR ID: AT1G60650

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain

Pathogen responsiveness: -2.73

General responsiveness: -2.40

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to cold, negative regulation of transcription, DNA-templated, positive regulation of mRNA splicing, via spliceosome, response to water deprivation


GO cellular component


nucleus, nuclear speck


GO molecular function


DNA binding, zinc ion binding, RNA binding


Protein domain


PfamPF00098, Zinc knuckle
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM
SMARTSM00343, ZnF_C2HC

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.